Function reference • CellSurvAssay

CellSurvAssay

An R package that makes Clonogenic Survival Analysis in R extremely easy.

CellSurvAssay: CellSurvAssay

Import data

Helps importing your raw data set

importData(): Imports the data

Fit linear-quadratic model

Helps fit the linear quadratic model for a cell type

lqmodelFit(): Fits the Linear Quadratic Model

Plot cell-survival curves

Helps plot the cell-survival curves and customize them. ggplotCSCurve() is the recommended function.

ggplotCSCurve(): Plots Cell Survival Curves using ggplot

plotCSCurve(): Plots Cell Survival Curves

Compare two cell-survival curves

Helps compare two curves using ANOVA

compareCurves(): Compares two cell survival curves using ANOVA.

Calculate DER

Helps calculate the Dose Enhancement Ratios.

calculateDER(): Calculates the Dose Enhancement Ratio

Example data set

CASP8_data: CASP8 data set